Workbench Command is a set of command-line tools that can be used to perform simple and complex operations within Connectome Workbench.
MAKE ADJACENCY MATRIX OF A CIFTI LABEL FILE
wb_command -cifti-label-adjacency
<label-in> - the input cifti label file
<adjacency-out> - output - the output cifti pconn adjacency matrix
[-left-surface] - specify the left surface to use
<surface> - the left surface file
[-right-surface] - specify the right surface to use
<surface> - the right surface file
[-cerebellum-surface] - specify the cerebellum surface to use
<surface> - the cerebellum surface file
Find face-adjacent voxels and connected vertices that have different
label values, and count them for each pair. Put the resulting counts
into a parcellated connectivity file, with the diagonal being zero. This
gives a rough estimate of how long or expansive the border between two
labels is.