Workbench Command is a set of command-line tools that can be used to perform simple and complex operations within Connectome Workbench.
WRITE A CIFTI STRUCTURE AS METRIC, LABEL OR VOLUME wb_command -cifti-separate <cifti-in> - the cifti to separate a component of <direction> - which direction to separate into components, ROW or COLUMN [-volume-all] - separate all volume structures into a volume file <volume-out> - output - the output volume [-roi] - also output the roi of which voxels have data <roi-out> - output - the roi output volume [-label] - output a volume label file indicating the location of structures <label-out> - output - the label output volume [-crop] - crop volume to the size of the data rather than using the original volume size [-label] - repeatable - separate a surface model into a surface label file <structure> - the structure to output <label-out> - output - the output label file [-roi] - also output the roi of which vertices have data <roi-out> - output - the roi output metric [-metric] - repeatable - separate a surface model into a metric file <structure> - the structure to output <metric-out> - output - the output metric [-roi] - also output the roi of which vertices have data <roi-out> - output - the roi output metric [-volume] - repeatable - separate a volume structure into a volume file <structure> - the structure to output <volume-out> - output - the output volume [-roi] - also output the roi of which voxels have data <roi-out> - output - the roi output volume [-crop] - crop volume to the size of the component rather than using the original volume size For dtseries, dscalar, and dlabel, use COLUMN for <direction>, and if you have a symmetric dconn, COLUMN is more efficient. You must specify at least one of -metric, -volume-all, -volume, or -label for this command to do anything. Output volumes will spatially line up with their original positions, whether or not they are cropped. Volume files produced by separating a dlabel file, or from the -label suboption of -volume-all, will be label volumes, see -volume-help. For each <structure> argument, use one of the following strings: CORTEX_LEFT CORTEX_RIGHT CEREBELLUM ACCUMBENS_LEFT ACCUMBENS_RIGHT ALL_GREY_MATTER ALL_WHITE_MATTER AMYGDALA_LEFT AMYGDALA_RIGHT BRAIN_STEM CAUDATE_LEFT CAUDATE_RIGHT CEREBELLAR_WHITE_MATTER_LEFT CEREBELLAR_WHITE_MATTER_RIGHT CEREBELLUM_LEFT CEREBELLUM_RIGHT CEREBRAL_WHITE_MATTER_LEFT CEREBRAL_WHITE_MATTER_RIGHT CORTEX DIENCEPHALON_VENTRAL_LEFT DIENCEPHALON_VENTRAL_RIGHT HIPPOCAMPUS_LEFT HIPPOCAMPUS_RIGHT INVALID OTHER OTHER_GREY_MATTER OTHER_WHITE_MATTER PALLIDUM_LEFT PALLIDUM_RIGHT PUTAMEN_LEFT PUTAMEN_RIGHT THALAMUS_LEFT THALAMUS_RIGHT