Using Workbench Command

Workbench Command is a set of command-line tools that can be used to perform simple and complex operations within Connectome Workbench.

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CONVERT BINGHAM PARAMETER VOLUMES TO FIBER ORIENTATION FILE
   wb_command -convert-fiber-orientations
      <label-volume> - volume of cifti structure labels
      <fiber-out> - output - the output fiber orientation file

      [-fiber] - repeatable - specify the parameter volumes for a fiber
         <mean-f> - mean fiber strength
         <stdev-f> - standard deviation of fiber strength
         <theta> - theta angle
         <phi> - phi angle
         <psi> - psi angle
         <ka> - ka bingham parameter
         <kb> - kb bingham parameter

      Takes precomputed bingham parameters from volume files and converts them
      to the format workbench uses for display.  The <label-volume> argument
      must be a label volume, where the labels use these strings:


      CORTEX_LEFT
      CORTEX_RIGHT
      CEREBELLUM
      ACCUMBENS_LEFT
      ACCUMBENS_RIGHT
      ALL_GREY_MATTER
      ALL_WHITE_MATTER
      AMYGDALA_LEFT
      AMYGDALA_RIGHT
      BRAIN_STEM
      CAUDATE_LEFT
      CAUDATE_RIGHT
      CEREBELLAR_WHITE_MATTER_LEFT
      CEREBELLAR_WHITE_MATTER_RIGHT
      CEREBELLUM_LEFT
      CEREBELLUM_RIGHT
      CEREBRAL_WHITE_MATTER_LEFT
      CEREBRAL_WHITE_MATTER_RIGHT
      CORTEX
      DIENCEPHALON_VENTRAL_LEFT
      DIENCEPHALON_VENTRAL_RIGHT
      HIPPOCAMPUS_LEFT
      HIPPOCAMPUS_RIGHT
      INVALID
      OTHER
      OTHER_GREY_MATTER
      OTHER_WHITE_MATTER
      PALLIDUM_LEFT
      PALLIDUM_RIGHT
      PUTAMEN_LEFT
      PUTAMEN_RIGHT
      THALAMUS_LEFT
      THALAMUS_RIGHT