Workbench Command is a set of command-line tools that can be used to perform simple and complex operations within Connectome Workbench.
ESTIMATE FIBER ORIENTATION DISTRIBUTIONS FROM BEDPOSTX SAMPLES
wb_command -estimate-fiber-binghams
<merged_f1samples> - fiber 1 strength samples
<merged_th1samples> - fiber 1 theta samples
<merged_ph1samples> - fiber 1 phi samples
<merged_f2samples> - fiber 2 strength samples
<merged_th2samples> - fiber 2 theta samples
<merged_ph2samples> - fiber 2 phi samples
<merged_f3samples> - fiber 3 strength samples
<merged_th3samples> - fiber 3 theta samples
<merged_ph3samples> - fiber 3 phi samples
<label-volume> - volume of cifti structure labels
<cifti-out> - output - output cifti fiber distributons file
This command does an estimation of a bingham distribution for each fiber
orientation in each voxel which is labeled a structure identifier. These
labelings come from the <label-volume> argument, which must have labels
that match the following strings:
CORTEX_LEFT
CORTEX_RIGHT
CEREBELLUM
ACCUMBENS_LEFT
ACCUMBENS_RIGHT
ALL_GREY_MATTER
ALL_WHITE_MATTER
AMYGDALA_LEFT
AMYGDALA_RIGHT
BRAIN_STEM
CAUDATE_LEFT
CAUDATE_RIGHT
CEREBELLAR_WHITE_MATTER_LEFT
CEREBELLAR_WHITE_MATTER_RIGHT
CEREBELLUM_LEFT
CEREBELLUM_RIGHT
CEREBRAL_WHITE_MATTER_LEFT
CEREBRAL_WHITE_MATTER_RIGHT
CORTEX
DIENCEPHALON_VENTRAL_LEFT
DIENCEPHALON_VENTRAL_RIGHT
HIPPOCAMPUS_LEFT
HIPPOCAMPUS_RIGHT
INVALID
OTHER
OTHER_GREY_MATTER
OTHER_WHITE_MATTER
PALLIDUM_LEFT
PALLIDUM_RIGHT
PUTAMEN_LEFT
PUTAMEN_RIGHT
THALAMUS_LEFT
THALAMUS_RIGHT