Workbench Command is a set of command-line tools that can be used to perform simple and complex operations within Connectome Workbench.
LIST INFORMATION ABOUT A FILE'S CONTENT
wb_command -file-information
<data-file> - data file
[-no-map-info] - do not show map information for files that support maps
[-only-step-interval] - suppress normal output, print the interval
between maps
[-only-number-of-maps] - suppress normal output, print the number of maps
[-only-map-names] - suppress normal output, print the names of all maps
[-only-metadata] - suppress normal output, print file metadata
[-key] - only print the metadata for one key, with no formatting
<key> - the metadata key
[-only-cifti-xml] - suppress normal output, print the cifti xml if the
file type has it
[-czi] - For a CZI file, show information from the libCZI Info Command
instead of the Workbench CZI File
[-czi-all-sub-blocks] - show all sub-blocks in CZI file (may produce long
output)
[-czi-xml] - show XML from CZI file
List information about the content of a data file. Only one -only option
may be specified. The information listed when no -only option is present
is dependent upon the type of data file.
Library paths:
/usr/local/qt-install/plugins
/mnt/workspace/release/CommandLine
File and extensions for reading and writing:
Annotation: wb_annot
Annotation Text Substitution: wb_annsub.csv
Border: border, wb_border
CIFTI - Dense: dconn.nii
CIFTI - Dense Label: dlabel.nii
CIFTI - Dense Parcel: dpconn.nii
CIFTI - Dense Scalar: dscalar.nii
CIFTI - Dense Data Series: dtseries.nii
CIFTI - Fiber Orientations TEMPORARY: fiberTEMP.nii
CIFTI - Fiber Trajectory TEMPORARY: trajTEMP.wbsparse
CIFTI - Fiber Trajectory Maps: trajMaps.wbsparse
CIFTI - Parcel: pconn.nii
CIFTI - Parcel Dense: pdconn.nii
CIFTI - Parcel Label: plabel.nii
CIFTI - Parcel Scalar: pscalar.nii
CIFTI - Parcel Series: ptseries.nii
CIFTI - Scalar Data Series: sdseries.nii
CZI Image: czi
Foci: foci, wb_foci
Histology Slices: metaczi, meta-image
Image Read: bmp, gif, jpeg, jpg, png, ppm, tif, tiff
Write: bmp, jpeg, jpg, png, ppm, tif, tiff
Label: label.gii
Metric: func.gii, shape.gii
OME-ZARR Image File: ome.zarr, ome.zarr.zip
Palette: palette, wb_palette
RGBA: rgba.gii
Samples: wb_samples
Scene: scene, wb_scene
Specification: spec, wb_spec
Surface: surf.gii
Volume: nii, nii.gz