Using Workbench Command

Workbench Command is a set of command-line tools that can be used to perform simple and complex operations within Connectome Workbench.

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MAP LABEL FILE TO VOLUME
   wb_command -label-to-volume-mapping
      <label> - the input label file
      <surface> - the surface to use coordinates from
      <volume-space> - a volume file in the desired output volume space
      <volume-out> - output - the output volume file

      [-nearest-vertex] - use the label from the vertex closest to the voxel
         center
         <distance> - how far from the surface to map labels to voxels, in mm

      [-ribbon-constrained] - use ribbon constrained mapping algorithm
         <inner-surf> - the inner surface of the ribbon
         <outer-surf> - the outer surface of the ribbon

         [-voxel-subdiv] - voxel divisions while estimating voxel weights
            <subdiv-num> - number of subdivisions, default 3

         [-greedy] - also put labels in voxels with less than 50% partial
            volume (legacy behavior)

         [-thick-columns] - use overlapping columns (legacy method)

      Maps labels from a gifti label file into a volume file.  You must specify
      exactly one mapping method option.  The -nearest-vertex method uses the
      label from the vertex closest to the voxel center.  The
      -ribbon-constrained method uses the same method as in
      -volume-to-surface-mapping, then uses the weights in reverse, with
      popularity logic to decide on a label to use.